I would get neither the 105 AF-D or 105 VR. I'd get the Tamron 90 AF - it's cheaper and you get a excellent portrait lens to boot.
But if I had to choose either the 105 AFD and 105 VR, I'd choose the AFD, Why?
1. In Macro work, you don't need fast AF.
2. In Macro work, you'll be using a tripod most of time - so VR isn't necessary. And were it is helpful is for a v.limited range of use.
3. The AF-D has an aperture ring - good if you want to use extension rings (although you can use AF rings), to reverse mount the lens and to use a set of bellows.
Go Email Bjorn and ask his expert opinion - he will tell you the same things.
The Tamron has the same creamy bokeh that the new 105 VR plus an aperture ring at half the price. And it won't break the bank.